ajcod.c

Codon Constructors

All constructors return a new object by pointer. It is the responsibility of the user to first destroy any previous object. The target pointer does not need to be initialised to NULL, but it is good programming practice to do so anyway.

Function ajCodNew

Default constructor for empty AJAX codon objects.

Synopsis

Prototype

AjPCod ajCodNew (
      void
);

Returns

AjPCod:Pointer to an codon object

Description

Default constructor for empty AJAX codon objects.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodNewCode

Default constructor for empty AJAX codon usage objects, with the amino acid assignments taken from a standard genetic code.

Synopsis

Prototype

AjPCod ajCodNewCode (
      ajint code
);

Input

code:(Input)Genetic code number

Returns

AjPCod:Pointer to an codon object

Description

Default constructor for empty AJAX codon usage objects, with the amino acid assignments taken from a standard genetic code.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodDup

Duplicate a codon object

Synopsis

Prototype

AjPCod ajCodDup (
      const AjPCod thys
);

Input

thys:(Input)Codon to duplicate

Returns

AjPCod:Pointer to an codon object

Description

Duplicate a codon object

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Codon Destructors

Desctuctor(s) for AjPCod objects

Function ajCodDel

Default destructor for AJAX codon objects.

Synopsis

Prototype

void ajCodDel (
      AjPCod* pthys
);

Output

pthys:(Output)codon usage structure

Returns

void:No return value

Description

Default destructor for AJAX codon objects.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Codon Functions

Function(s) for AjPCod objects

Function ajCodBacktranslate

Backtranslate a string

Synopsis

Prototype

void ajCodBacktranslate (
      AjPStr* b,
      const AjPStr a,
      const AjPCod thys
);

Input

a:(Input)sequence
thys:(Input)codon usage object

Output

b:(Output)backtranslated sequence

Returns

void:No return value

Description

Backtranslate a string

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodBacktranslateAmbig

Backtranslate a string to a fully ambiguous nucleotide sequence as a string

Synopsis

Prototype

void ajCodBacktranslateAmbig (
      AjPStr* b,
      const AjPStr a,
      const AjPCod thys
);

Input

a:(Input)sequence
thys:(Input)codon usage object

Output

b:(Output)backtranslated sequence

Returns

void:No return value

Description

Backtranslate a string to a fully ambiguous nucleotide sequence as a string

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodBase

Return one codon value given a possibly ambiguous base

Synopsis

Prototype

ajint ajCodBase (
      ajint c
);

Input

c:(Input)base

Returns

ajint:single base value

Description

Return one codon value given a possibly ambiguous base

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodCalcGribskov

Calculate Gribskov statistic (count per thousand) in AjPCod internals

Synopsis

Prototype

void ajCodCalcGribskov (
      AjPCod thys,
      const AjPStr s
);

Input

s:(Input)sequence

Input & Output

thys:(Modify)codon usage for sequence

Returns

void:No return value

Description

Calculate Gribskov statistic (count per thousand) in AjPCod internals

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodCalcNc

Calculate effective number of codons Wright, F. (1990) Gene 87:23-29

Synopsis

Prototype

double ajCodCalcNc (
      const AjPCod thys
);

Input

thys:(Input)codon usage

Returns

double:Nc

Description

Calculate effective number of codons Wright, F. (1990) Gene 87:23-29

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodCalculateUsage

Calculate fractional and thousand elements of a codon object Used for creating a codon usage table Requires pre-running of ajCodCountTriplets

Synopsis

Prototype

void ajCodCalculateUsage (
      AjPCod thys,
      ajint c
);

Input

c:(Input)triplet count

Input & Output

thys:(Modify)Codon object

Returns

void:No return value

Description

Calculate fractional and thousand elements of a codon object Used for creating a codon usage table Requires pre-running of ajCodCountTriplets

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodClear

Zero all entries

To retain the genetics code (the amino acids for each codon) use ajCodClearData instead.

Synopsis

Prototype

void ajCodClear (
      AjPCod thys
);

Output

thys:(Output)codon usage structure

Returns

void:No return value

Description

Zero all entries

To retain the genetics code (the amino acids for each codon) use ajCodClearData instead.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodClearData

Zero the name, number count and fraction codon entries

Synopsis

Prototype

void ajCodClearData (
      AjPCod thys
);

Output

thys:(Output)codon usage structure

Returns

void:No return value

Description

Zero the name, number count and fraction codon entries

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodCountTriplets

Load the num array of a codon structure Used for creating a codon usage table

Skips triplets with ambiguity codes and any incomplete triplet at the end.

Synopsis

Prototype

void ajCodCountTriplets (
      AjPCod thys,
      const AjPStr s,
      ajint* c
);

Input

s:(Input)dna sequence

Output

thys:(Output)Codon object
c:(Output)triplet count

Returns

void:No return value

Description

Load the num array of a codon structure Used for creating a codon usage table

Skips triplets with ambiguity codes and any incomplete triplet at the end.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodIndex

Return a codon index given a three character codon

Can be called with any coding sequence of 3 or more bases, and will use only the first 3 bases of the input.

Synopsis

Prototype

ajint ajCodIndex (
      const AjPStr s
);

Input

s:(Input)Codon

Returns

ajint:Codon index AAA=0 TTT=3f

Description

Return a codon index given a three character codon

Can be called with any coding sequence of 3 or more bases, and will use only the first 3 bases of the input.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodIndexC

Return a codon index given a three character codon

Can be called with any coding sequence of 3 or more bases, and will use only the first 3 bases of the input.

Synopsis

Prototype

ajint ajCodIndexC (
      const char* codon
);

Input

codon:(Input)Codon pointer

Returns

ajint:codon index AAA=0 TTT=3f

Description

Return a codon index given a three character codon

Can be called with any coding sequence of 3 or more bases, and will use only the first 3 bases of the input.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodRead

Read a codon index from a filename using a specified format.

The format can be in the format argument, as a prefix format:: to the filename, or empty to allow all known formats to be tried.

Synopsis

Prototype

AjBool ajCodRead (
      AjPCod thys,
      const AjPStr fn,
      const AjPStr format
);

Input

fn:(Input)filename
format:(Input)format

Output

thys:(Output)Codon object

Returns

AjBool:ajTrue on success

Description

Read a codon index from a filename using a specified format.

The format can be in the format argument, as a prefix format:: to the filename, or empty to allow all known formats to be tried.

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodSetBacktranslate

Fill the codon usage object "back" element with the most commonly used triplet index for the amino acids

Synopsis

Prototype

void ajCodSetBacktranslate (
      AjPCod* thys
);

Input & Output

thys:(Modify)codon usage structure

Returns

void:No return value

Description

Fill the codon usage object "back" element with the most commonly used triplet index for the amino acids

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodTriplet

Convert triplet index to triple

Synopsis

Prototype

char* ajCodTriplet (
      ajint idx
);

Input

idx:(Input)triplet index

Returns

char*:Triplet

Description

Convert triplet index to triple

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodWriteOut

Write codon structure to output file

Synopsis

Prototype

void ajCodWriteOut (
      const AjPCod thys,
      AjPOutfile outf
);

Input

thys:(Input)codon usage

Input & Output

outf:(Modify)output file

Returns

void:No return value

Description

Write codon structure to output file

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodWrite

Write codon structure to output file

Synopsis

Prototype

void ajCodWrite (
      AjPCod thys,
      AjPFile outf
);

Input & Output

thys:(Modify)codon usage
outf:(Modify)output file

Returns

void:No return value

Description

Write codon structure to output file

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodComp

Calculate sequence composition

Synopsis

Prototype

void ajCodComp (
      ajint* NA,
      ajint* NC,
      ajint* NG,
      ajint* NT,
      const char* str
);

Input

str:(Input)sequence

Output

NA:(Output)number of A's
NC:(Output)number of C's
NG:(Output)number of G's
NT:(Output)number of T'

Returns

void:No return value

Description

Calculate sequence composition

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodCalcCai

Calculate codon adaptive index using equation 8 NAR 15:1281-1295

Synopsis

Prototype

double ajCodCalcCai (
      const AjPCod thys
);

Input

thys:(Input)codon usage

Returns

double:CAI

Description

Calculate codon adaptive index using equation 8 NAR 15:1281-1295

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodCaiW

Calculate codon adaptive index W values NAR 15:1281-1295

Synopsis

Prototype

double* ajCodCaiW (
      const AjPCod thys
);

Input

thys:(Input)codon usage

Returns

double*:w value array

Description

Calculate codon adaptive index W values NAR 15:1281-1295

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodCai

Calculate codon adaptive index using equation 7 NAR 15:1281-1295

Synopsis

Prototype

double ajCodCai (
      const AjPCod thys,
      const AjPStr str
);

Input

thys:(Input)codon usage
str:(Input)sequence

Returns

double:CAI

Description

Calculate codon adaptive index using equation 7 NAR 15:1281-1295

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetName

Returns the name of a codon table

Synopsis

Prototype

const AjPStr ajCodGetName (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const AjPStr:Original filename

Description

Returns the name of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetNameC

Returns the name of a codon table

Synopsis

Prototype

const char* ajCodGetNameC (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const char*:Original filename

Description

Returns the name of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetDesc

Returns the description of a codon table

Synopsis

Prototype

const AjPStr ajCodGetDesc (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const AjPStr:Original filename

Description

Returns the description of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetDescC

Returns the description of a codon table

Synopsis

Prototype

const char* ajCodGetDescC (
      const AjPCod thys
);

Input

thys:(Input)Codon usgage object

Returns

const char*:Original filename

Description

Returns the description of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetSpecies

Returns the species of a codon table

Synopsis

Prototype

const AjPStr ajCodGetSpecies (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const AjPStr:Species

Description

Returns the species of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetSpeciesC

Returns the species of a codon table

Synopsis

Prototype

const char* ajCodGetSpeciesC (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const char*:Species

Description

Returns the species of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetDivision

Returns the division of a codon table

Synopsis

Prototype

const AjPStr ajCodGetDivision (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const AjPStr:Division

Description

Returns the division of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetDivisionC

Returns the division of a codon table

Synopsis

Prototype

const char* ajCodGetDivisionC (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const char*:Division

Description

Returns the division of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetRelease

Returns the release of a codon table

Synopsis

Prototype

const AjPStr ajCodGetRelease (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const AjPStr:Release

Description

Returns the release of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetReleaseC

Returns the release of a codon table

Synopsis

Prototype

const char* ajCodGetReleaseC (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

const char*:Release

Description

Returns the release of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetNumcodon

Returns the number of codons in a codon table

Synopsis

Prototype

ajint ajCodGetNumcodon (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

ajint:Number of codons

Description

Returns the number of codons in a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetNumcds

Returns the numbers od CDSs in a codon table

Synopsis

Prototype

ajint ajCodGetNumcds (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

ajint:Number of CDSs

Description

Returns the numbers od CDSs in a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetCode

Returns the genetic code of a codon table

Synopsis

Prototype

ajint ajCodGetCode (
      const AjPCod thys
);

Input

thys:(Input)Codon usage object

Returns

ajint:Number of CDSs

Description

Returns the genetic code of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssName

Assigns the name of a codon table

Synopsis

Prototype

void ajCodAssName (
      AjPCod thys,
      const AjPStr name
);

Input

name:(Input)Name

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the name of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssNameC

Assigns the name of a codon table

Synopsis

Prototype

void ajCodAssNameC (
      AjPCod thys,
      const char* name
);

Input

name:(Input)Name

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the name of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssDesc

Assigns the description of a codon table

Synopsis

Prototype

void ajCodAssDesc (
      AjPCod thys,
      const AjPStr desc
);

Input

desc:(Input)Description

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the description of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssDescC

Assigns the description of a codon table

Synopsis

Prototype

void ajCodAssDescC (
      AjPCod thys,
      const char* desc
);

Input

desc:(Input)Description

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the description of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssSpecies

Assigns the species of a codon table

Synopsis

Prototype

void ajCodAssSpecies (
      AjPCod thys,
      const AjPStr species
);

Input

species:(Input)Species

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the species of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssSpeciesC

Assigns the species of a codon table

Synopsis

Prototype

void ajCodAssSpeciesC (
      AjPCod thys,
      const char* species
);

Input

species:(Input)Species

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the species of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssRelease

Assigns the release of a codon table

Synopsis

Prototype

void ajCodAssRelease (
      AjPCod thys,
      const AjPStr release
);

Input

release:(Input)Release

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the release of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssReleaseC

Assigns the of a codon table

Synopsis

Prototype

void ajCodAssReleaseC (
      AjPCod thys,
      const char* release
);

Input

release:(Input)Release

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssDivision

Assigns the division of a codon table

Synopsis

Prototype

void ajCodAssDivision (
      AjPCod thys,
      const AjPStr division
);

Input

division:(Input)Division

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the division of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssDivisionC

Assigns the division of a codon table

Synopsis

Prototype

void ajCodAssDivisionC (
      AjPCod thys,
      const char* division
);

Input

division:(Input)Division

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the division of a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssNumcodon

Assigns the number of codons in a codon table

Synopsis

Prototype

void ajCodAssNumcodon (
      AjPCod thys,
      ajint numcodon
);

Input

numcodon:(Input)Number of codons

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the number of codons in a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssNumcds

Assigns the number of CDSs in a codon table

Synopsis

Prototype

void ajCodAssNumcds (
      AjPCod thys,
      ajint numcds
);

Input

numcds:(Input)Number of codons

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the number of CDSs in a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodAssCode

Assigns the genetic code in a codon table

Synopsis

Prototype

void ajCodAssCode (
      AjPCod thys,
      ajint geneticcode
);

Input

geneticcode:(Input)Genetic code

Input & Output

thys:(Modify)Codon usage object

Returns

void:No return value

Description

Assigns the genetic code in a codon table

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodOutFormat

Tests the output format for an outcodon ACD type

Synopsis

Prototype

ajint ajCodOutFormat (
      const AjPStr name
);

Input

name:(Input)Format name

Returns

ajint:Internal format index, of -1 if not found

Description

Tests the output format for an outcodon ACD type

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodPrintFormat

Reports the internal data structures

Synopsis

Prototype

void ajCodPrintFormat (
      AjPFile outf,
      AjBool full
);

Input

full:(Input)Full report (usually ajFalse)

Input & Output

outf:(Modify)Output file

Returns

void:No return value

Description

Reports the internal data structures

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodGetCodonlist

Writes codon triplets to a string list

Synopsis

Prototype

void ajCodGetCodonlist (
      const AjPCod cod,
      AjPList list
);

Input

cod:(Input)Cusp file

Output

list:(Output)List with character distributions

Returns

void:No return value

Description

Writes codon triplets to a string list

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0

Function ajCodExit

Cleans up codon usage processing internal memory

Synopsis

Prototype

void ajCodExit (
      void
);

Returns

void:No return value

Description

Cleans up codon usage processing internal memory

Usage

See source code

Example

In preparation

Errors

See source code

Dependencies

See source code

See Also

See other functions in this section

Availability

In release 3.0.0