next up previous contents
Next: AAINDEX Up: Other data Previous: PROSITE   Contents


Prints is a database of diagnostic patterns of blocks of sequence homology in protein families. The PRINTS database can be searched using the EMBOSS program pscan.

PRINTS can be obtained via anonymous FTP.3.13 The database is made available as compressed files which should be uncompressed using gzip before integrating them into EMBOSS

PRINTS is integrated with EMBOSS using the program printsextract

% printsextract
Extract data from PRINTS
Input file: /data/prints/prints27_0.dat

The PRINTS database is now integrated with EMBOSS.

Peter Rice 2007-04-26