DOMALIGN Applications

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The DOMALIGN programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.

Applications in the current domalign release

Program name	Description
allversusall	Sequence similarity data from all-versus-all comparison
domainalign	Generate alignments (DAF file) for nodes in a DCF file
domainrep	Reorder DCF file to identify representative structures
seqalign	Extend alignments (DAF file) with sequences (DHF file)

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