######################################## # Program: garnier # Rundate: Fri Nov 08 15:46:27 2002 # Report_format: regions # Report_file: report.regions ######################################## #======================================= # # Sequence: 100K_RAT from: 1 to: 889 # HitCount: 206 # # DCH = 0, DCS = 0 # # Please cite: # Garnier, Osguthorpe and Robson (1978) J. Mol. Biol. 120:97-120 # # #======================================= helix from 1 to 6 (6 residues) Max score: 0.000 (helix: H) turn from 7 to 7 (1 residues) Max score: 0.000 (, turns: T) helix from 8 to 17 (10 residues) Max score: 0.000 (helix: H) site from 18 to 20 (3 residues) Max score: 0.000 (, coil: C) turn from 21 to 25 (5 residues) Max score: 0.000 (, turns: T) strand from 26 to 28 (3 residues) Max score: 0.000 (, sheet: E) helix from 29 to 38 (10 residues) Max score: 0.000 (helix: H) strand from 39 to 40 (2 residues) Max score: 0.000 (, sheet: E) helix from 41 to 50 (10 residues) Max score: 0.000 (helix: H) site from 51 to 53 (3 residues) Max score: 0.000 (, coil: C) turn from 54 to 55 (2 residues) Max score: 0.000 (, turns: T) site from 56 to 62 (7 residues) Max score: 0.000 (, coil: C) helix from 63 to 77 (15 residues) Max score: 0.000 (helix: H) site from 78 to 78 (1 residues) Max score: 0.000 (, coil: C) helix from 79 to 85 (7 residues) Max score: 0.000 (helix: H) turn from 86 to 88 (3 residues) Max score: 0.000 (, turns: T) site from 89 to 89 (1 residues) Max score: 0.000 (, coil: C) helix from 90 to 91 (2 residues) Max score: 0.000 (helix: H) strand from 92 to 93 (2 residues) Max score: 0.000 (, sheet: E) site from 94 to 96 (3 residues) Max score: 0.000 (, coil: C) turn from 97 to 99 (3 residues) Max score: 0.000 (, turns: T) site from 100 to 100 (1 residues) Max score: 0.000 (, coil: C) helix from 101 to 101 (1 residues) Max score: 0.000 (helix: H) site from 102 to 103 (2 residues) Max score: 0.000 (, coil: C) helix from 104 to 107 (4 residues) Max score: 0.000 (helix: H) turn from 108 to 109 (2 residues) Max score: 0.000 (, turns: T) site from 110 to 112 (3 residues) Max score: 0.000 (, coil: C) turn from 113 to 113 (1 residues) Max score: 0.000 (, turns: T) strand from 114 to 114 (1 residues) Max score: 0.000 (, sheet: E) turn from 115 to 121 (7 residues) Max score: 0.000 (, turns: T) strand from 122 to 123 (2 residues) Max score: 0.000 (, sheet: E) turn from 124 to 125 (2 residues) Max score: 0.000 (, turns: T) site from 126 to 130 (5 residues) Max score: 0.000 (, coil: C) turn from 131 to 131 (1 residues) Max score: 0.000 (, turns: T) strand from 132 to 133 (2 residues) Max score: 0.000 (, sheet: E) helix from 134 to 144 (11 residues) Max score: 0.000 (helix: H) site from 145 to 145 (1 residues) Max score: 0.000 (, coil: C) turn from 146 to 146 (1 residues) Max score: 0.000 (, turns: T) site from 147 to 152 (6 residues) Max score: 0.000 (, coil: C) helix from 153 to 154 (2 residues) Max score: 0.000 (helix: H) strand from 155 to 156 (2 residues) Max score: 0.000 (, sheet: E) turn from 157 to 158 (2 residues) Max score: 0.000 (, turns: T) site from 159 to 161 (3 residues) Max score: 0.000 (, coil: C) turn from 162 to 164 (3 residues) Max score: 0.000 (, turns: T) site from 165 to 165 (1 residues) Max score: 0.000 (, coil: C) strand from 166 to 167 (2 residues) Max score: 0.000 (, sheet: E) turn from 168 to 173 (6 residues) Max score: 0.000 (, turns: T) site from 174 to 174 (1 residues) Max score: 0.000 (, coil: C) strand from 175 to 179 (5 residues) Max score: 0.000 (, sheet: E) helix from 180 to 209 (30 residues) Max score: 0.000 (helix: H) site from 210 to 213 (4 residues) Max score: 0.000 (, coil: C) helix from 214 to 224 (11 residues) Max score: 0.000 (helix: H) turn from 225 to 225 (1 residues) Max score: 0.000 (, turns: T) site from 226 to 231 (6 residues) Max score: 0.000 (, coil: C) helix from 232 to 248 (17 residues) Max score: 0.000 (helix: H) site from 249 to 251 (3 residues) Max score: 0.000 (, coil: C) turn from 252 to 253 (2 residues) Max score: 0.000 (, turns: T) site from 254 to 255 (2 residues) Max score: 0.000 (, coil: C) turn from 256 to 259 (4 residues) Max score: 0.000 (, turns: T) strand from 260 to 261 (2 residues) Max score: 0.000 (, sheet: E) turn from 262 to 266 (5 residues) Max score: 0.000 (, turns: T) strand from 267 to 269 (3 residues) Max score: 0.000 (, sheet: E) helix from 270 to 277 (8 residues) Max score: 0.000 (helix: H) turn from 278 to 279 (2 residues) Max score: 0.000 (, turns: T) helix from 280 to 281 (2 residues) Max score: 0.000 (helix: H) site from 282 to 286 (5 residues) Max score: 0.000 (, coil: C) helix from 287 to 293 (7 residues) Max score: 0.000 (helix: H) site from 294 to 299 (6 residues) Max score: 0.000 (, coil: C) turn from 300 to 300 (1 residues) Max score: 0.000 (, turns: T) site from 301 to 301 (1 residues) Max score: 0.000 (, coil: C) strand from 302 to 304 (3 residues) Max score: 0.000 (, sheet: E) helix from 305 to 305 (1 residues) Max score: 0.000 (helix: H) site from 306 to 307 (2 residues) Max score: 0.000 (, coil: C) helix from 308 to 326 (19 residues) Max score: 0.000 (helix: H) site from 327 to 328 (2 residues) Max score: 0.000 (, coil: C) turn from 329 to 329 (1 residues) Max score: 0.000 (, turns: T) site from 330 to 331 (2 residues) Max score: 0.000 (, coil: C) strand from 332 to 334 (3 residues) Max score: 0.000 (, sheet: E) helix from 335 to 343 (9 residues) Max score: 0.000 (helix: H) strand from 344 to 348 (5 residues) Max score: 0.000 (, sheet: E) turn from 349 to 349 (1 residues) Max score: 0.000 (, turns: T) site from 350 to 350 (1 residues) Max score: 0.000 (, coil: C) turn from 351 to 359 (9 residues) Max score: 0.000 (, turns: T) site from 360 to 361 (2 residues) Max score: 0.000 (, coil: C) helix from 362 to 369 (8 residues) Max score: 0.000 (helix: H) strand from 370 to 373 (4 residues) Max score: 0.000 (, sheet: E) site from 374 to 376 (3 residues) Max score: 0.000 (, coil: C) turn from 377 to 378 (2 residues) Max score: 0.000 (, turns: T) site from 379 to 382 (4 residues) Max score: 0.000 (, coil: C) strand from 383 to 388 (6 residues) Max score: 0.000 (, sheet: E) helix from 389 to 395 (7 residues) Max score: 0.000 (helix: H) site from 396 to 396 (1 residues) Max score: 0.000 (, coil: C) turn from 397 to 399 (3 residues) Max score: 0.000 (, turns: T) site from 400 to 400 (1 residues) Max score: 0.000 (, coil: C) turn from 401 to 402 (2 residues) Max score: 0.000 (, turns: T) helix from 403 to 403 (1 residues) Max score: 0.000 (helix: H) strand from 404 to 404 (1 residues) Max score: 0.000 (, sheet: E) helix from 405 to 405 (1 residues) Max score: 0.000 (helix: H) strand from 406 to 407 (2 residues) Max score: 0.000 (, sheet: E) turn from 408 to 412 (5 residues) Max score: 0.000 (, turns: T) site from 413 to 414 (2 residues) Max score: 0.000 (, coil: C) strand from 415 to 420 (6 residues) Max score: 0.000 (, sheet: E) site from 421 to 428 (8 residues) Max score: 0.000 (, coil: C) helix from 429 to 438 (10 residues) Max score: 0.000 (helix: H) turn from 439 to 440 (2 residues) Max score: 0.000 (, turns: T) site from 441 to 445 (5 residues) Max score: 0.000 (, coil: C) turn from 446 to 446 (1 residues) Max score: 0.000 (, turns: T) site from 447 to 447 (1 residues) Max score: 0.000 (, coil: C) turn from 448 to 462 (15 residues) Max score: 0.000 (, turns: T) site from 463 to 465 (3 residues) Max score: 0.000 (, coil: C) turn from 466 to 466 (1 residues) Max score: 0.000 (, turns: T) site from 467 to 468 (2 residues) Max score: 0.000 (, coil: C) turn from 469 to 469 (1 residues) Max score: 0.000 (, turns: T) site from 470 to 470 (1 residues) Max score: 0.000 (, coil: C) turn from 471 to 472 (2 residues) Max score: 0.000 (, turns: T) site from 473 to 473 (1 residues) Max score: 0.000 (, coil: C) turn from 474 to 476 (3 residues) Max score: 0.000 (, turns: T) site from 477 to 481 (5 residues) Max score: 0.000 (, coil: C) helix from 482 to 487 (6 residues) Max score: 0.000 (helix: H) site from 488 to 488 (1 residues) Max score: 0.000 (, coil: C) turn from 489 to 491 (3 residues) Max score: 0.000 (, turns: T) site from 492 to 493 (2 residues) Max score: 0.000 (, coil: C) turn from 494 to 495 (2 residues) Max score: 0.000 (, turns: T) strand from 496 to 500 (5 residues) Max score: 0.000 (, sheet: E) helix from 501 to 508 (8 residues) Max score: 0.000 (helix: H) strand from 509 to 512 (4 residues) Max score: 0.000 (, sheet: E) helix from 513 to 543 (31 residues) Max score: 0.000 (helix: H) site from 544 to 546 (3 residues) Max score: 0.000 (, coil: C) turn from 547 to 549 (3 residues) Max score: 0.000 (, turns: T) site from 550 to 550 (1 residues) Max score: 0.000 (, coil: C) strand from 551 to 555 (5 residues) Max score: 0.000 (, sheet: E) helix from 556 to 557 (2 residues) Max score: 0.000 (helix: H) site from 558 to 559 (2 residues) Max score: 0.000 (, coil: C) helix from 560 to 568 (9 residues) Max score: 0.000 (helix: H) turn from 569 to 572 (4 residues) Max score: 0.000 (, turns: T) site from 573 to 574 (2 residues) Max score: 0.000 (, coil: C) turn from 575 to 575 (1 residues) Max score: 0.000 (, turns: T) strand from 576 to 582 (7 residues) Max score: 0.000 (, sheet: E) turn from 583 to 590 (8 residues) Max score: 0.000 (, turns: T) site from 591 to 592 (2 residues) Max score: 0.000 (, coil: C) strand from 593 to 597 (5 residues) Max score: 0.000 (, sheet: E) turn from 598 to 602 (5 residues) Max score: 0.000 (, turns: T) strand from 603 to 605 (3 residues) Max score: 0.000 (, sheet: E) site from 606 to 607 (2 residues) Max score: 0.000 (, coil: C) turn from 608 to 609 (2 residues) Max score: 0.000 (, turns: T) site from 610 to 612 (3 residues) Max score: 0.000 (, coil: C) strand from 613 to 613 (1 residues) Max score: 0.000 (, sheet: E) helix from 614 to 616 (3 residues) Max score: 0.000 (helix: H) turn from 617 to 624 (8 residues) Max score: 0.000 (, turns: T) strand from 625 to 630 (6 residues) Max score: 0.000 (, sheet: E) turn from 631 to 634 (4 residues) Max score: 0.000 (, turns: T) strand from 635 to 636 (2 residues) Max score: 0.000 (, sheet: E) turn from 637 to 638 (2 residues) Max score: 0.000 (, turns: T) helix from 639 to 642 (4 residues) Max score: 0.000 (helix: H) strand from 643 to 649 (7 residues) Max score: 0.000 (, sheet: E) turn from 650 to 651 (2 residues) Max score: 0.000 (, turns: T) site from 652 to 653 (2 residues) Max score: 0.000 (, coil: C) turn from 654 to 655 (2 residues) Max score: 0.000 (, turns: T) site from 656 to 656 (1 residues) Max score: 0.000 (, coil: C) turn from 657 to 660 (4 residues) Max score: 0.000 (, turns: T) site from 661 to 664 (4 residues) Max score: 0.000 (, coil: C) helix from 665 to 672 (8 residues) Max score: 0.000 (helix: H) strand from 673 to 675 (3 residues) Max score: 0.000 (, sheet: E) site from 676 to 680 (5 residues) Max score: 0.000 (, coil: C) helix from 681 to 699 (19 residues) Max score: 0.000 (helix: H) turn from 700 to 702 (3 residues) Max score: 0.000 (, turns: T) site from 703 to 704 (2 residues) Max score: 0.000 (, coil: C) strand from 705 to 708 (4 residues) Max score: 0.000 (, sheet: E) turn from 709 to 712 (4 residues) Max score: 0.000 (, turns: T) site from 713 to 713 (1 residues) Max score: 0.000 (, coil: C) strand from 714 to 718 (5 residues) Max score: 0.000 (, sheet: E) turn from 719 to 719 (1 residues) Max score: 0.000 (, turns: T) strand from 720 to 724 (5 residues) Max score: 0.000 (, sheet: E) helix from 725 to 748 (24 residues) Max score: 0.000 (helix: H) strand from 749 to 751 (3 residues) Max score: 0.000 (, sheet: E) site from 752 to 756 (5 residues) Max score: 0.000 (, coil: C) helix from 757 to 767 (11 residues) Max score: 0.000 (helix: H) strand from 768 to 768 (1 residues) Max score: 0.000 (, sheet: E) turn from 769 to 769 (1 residues) Max score: 0.000 (, turns: T) site from 770 to 770 (1 residues) Max score: 0.000 (, coil: C) turn from 771 to 772 (2 residues) Max score: 0.000 (, turns: T) site from 773 to 774 (2 residues) Max score: 0.000 (, coil: C) strand from 775 to 783 (9 residues) Max score: 0.000 (, sheet: E) site from 784 to 791 (8 residues) Max score: 0.000 (, coil: C) helix from 792 to 801 (10 residues) Max score: 0.000 (helix: H) turn from 802 to 804 (3 residues) Max score: 0.000 (, turns: T) site from 805 to 812 (8 residues) Max score: 0.000 (, coil: C) helix from 813 to 817 (5 residues) Max score: 0.000 (helix: H) turn from 818 to 818 (1 residues) Max score: 0.000 (, turns: T) strand from 819 to 822 (4 residues) Max score: 0.000 (, sheet: E) turn from 823 to 824 (2 residues) Max score: 0.000 (, turns: T) site from 825 to 832 (8 residues) Max score: 0.000 (, coil: C) helix from 833 to 833 (1 residues) Max score: 0.000 (helix: H) turn from 834 to 836 (3 residues) Max score: 0.000 (, turns: T) site from 837 to 839 (3 residues) Max score: 0.000 (, coil: C) turn from 840 to 841 (2 residues) Max score: 0.000 (, turns: T) strand from 842 to 845 (4 residues) Max score: 0.000 (, sheet: E) site from 846 to 846 (1 residues) Max score: 0.000 (, coil: C) turn from 847 to 850 (4 residues) Max score: 0.000 (, turns: T) site from 851 to 852 (2 residues) Max score: 0.000 (, coil: C) turn from 853 to 857 (5 residues) Max score: 0.000 (, turns: T) strand from 858 to 865 (8 residues) Max score: 0.000 (, sheet: E) turn from 866 to 868 (3 residues) Max score: 0.000 (, turns: T) helix from 869 to 882 (14 residues) Max score: 0.000 (helix: H) turn from 883 to 887 (5 residues) Max score: 0.000 (, turns: T) strand from 888 to 889 (2 residues) Max score: 0.000 (, sheet: E) #--------------------------------------- # # Residue totals: H:364 E:149 T:191 C:185 # percent: H: 41.7 E: 17.1 T: 21.9 C: 21.2 # #---------------------------------------