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EMBOSS: Project Meeting (Jun 15th 1999)
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Attendees
Sanger Centre:
Peter Rice,
Ian Longden
HGMP:
Gary Williams,
Mark Faller, Jon Ison
EBI:
Apologies: Rodrigo Lopez, Martin Senger
1. Matters Arising
None.
2. General progress on release 0.0.4
Alan has updated the sources to remove compiler warning messages.
Jon is working on a set of dynamic programming applications. They
include (1) selection of a representative set of proteins from a set
of input sequences; (2) aligning two proteins by sequence using any
other sequence information such as secondary structure; (3) a simple
Needleman-Wunsch implementation.
Gary suggested Pise (Catherine Letonde) as another interface for EMBOSS.
He will send the URL to Peter.
3. Library documentation
Peter has produced a first draft of the library documentation, copied
to Jon for comments.
Peter will work on demonstration programs "demostring", "demotable",
"demolist" and "demosequence" with examples of the use and misuse
of the AJAX object types.
4. EMBnet Cuba Course
Peter will check through the applications needed for the Cuba course
and update them if necessary.
5. CCP11
Jon is planning a 1 day scientific meeting for library developers,
including EMBOSS, BTL and any other generic libraries.
6. Next meeting
Monday 21st June, usual time and place.
Peter Rice, Informatics Division, The Sanger Centre,
Wellcome Trust Genome Campus, Hinxton Hall, Cambridge, CB10 1SA, UK.