org.emboss.jemboss.gui
Class SetUpMenuBar

java.lang.Object
  org.emboss.jemboss.gui.SetUpMenuBar

public class SetUpMenuBar

extends java.lang.Object

Sets the top menu bar for Jemboss main window

Field Summary

private AdvancedOptions	ao advanced options
private javax.swing.JMenuItem	fileMenuShowres show saved results menu item
static LocalAndRemoteFileTreeFrame	localAndRemoteTree local and remote file manager window
static SequenceList	seqList sequence store list
private javax.swing.JMenuItem	showLocalRemoteFile local and remote file manager menu item
private ServerSetup	ss server settings

Constructor Summary

SetUpMenuBar(JembossParams mysettings, javax.swing.JFrame f, boolean withSoap)

Method Summary

void	deleteTmp(java.io.File cwd, java.lang.String suffix) Delete temporary files
void	exitJemboss()
static DragTree	getLocalDragTree() Get local file manager
static void	saveSequenceList() Save the sequence list for a future session.
void	setEnableFileManagers(boolean b) Enable/disable file manager menu item
void	setEnableShowResults(boolean b) Enable/disable show results menu item

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

seqList

public static SequenceList seqList

sequence store list

localAndRemoteTree

public static LocalAndRemoteFileTreeFrame localAndRemoteTree

local and remote file manager window

showLocalRemoteFile

private javax.swing.JMenuItem showLocalRemoteFile

local and remote file manager menu item

fileMenuShowres

private javax.swing.JMenuItem fileMenuShowres

show saved results menu item

ss

private ServerSetup ss

server settings

ao

private AdvancedOptions ao

advanced options

Constructor Detail

SetUpMenuBar

public SetUpMenuBar(JembossParams mysettings,
                    javax.swing.JFrame f,
                    boolean withSoap)

Parameters:

mysettings - jemboss properties

f - frame

withSoap - true if in client-server mode

Method Detail

setEnableFileManagers

public void setEnableFileManagers(boolean b)

Enable/disable file manager menu item

Parameters:

b - true to enable file manager menu item

setEnableShowResults

public void setEnableShowResults(boolean b)

Enable/disable show results menu item

Parameters:

b - true to enable show results menu item

getLocalDragTree

public static DragTree getLocalDragTree()

Get local file manager

Returns:

local file manager

deleteTmp

public void deleteTmp(java.io.File cwd,
                      java.lang.String suffix)

Delete temporary files

Parameters:

suffix - suffix of files to delete

exitJemboss

public void exitJemboss()

saveSequenceList

public static void saveSequenceList()

Save the sequence list for a future session.