org.emboss.jemboss.programs
Class RunEmbossApplication

java.lang.Object
  org.emboss.jemboss.programs.RunEmbossApplication

public class RunEmbossApplication

extends java.lang.Object

RunEmbossApplication class used to run an EMBOSS process

Field Summary

private java.lang.Process	p running process
private java.io.File	project running directory
private java.lang.String	status status of the process
private java.lang.String	stdout standard out

Constructor Summary

RunEmbossApplication(java.lang.String embossCommand, java.lang.String[] envp, java.io.File project)

Method Summary

java.lang.Process	getProcess()
java.lang.String	getProcessStdout()
java.lang.String	getStatus()
boolean	isProcessStdout()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

p

private java.lang.Process p

running process

stdout

private java.lang.String stdout

standard out

project

private java.io.File project

running directory

status

private java.lang.String status

status of the process

Constructor Detail

RunEmbossApplication

public RunEmbossApplication(java.lang.String embossCommand,
                            java.lang.String[] envp,
                            java.io.File project)

Parameters:

embossCommand - emboss command to run

envp - environment

project - running directory

Method Detail

isProcessStdout

public boolean isProcessStdout()

Returns:

true if there is any standard out

getProcessStdout

public java.lang.String getProcessStdout()

Returns:

standard out

getProcess

public java.lang.Process getProcess()

Returns:

process

getStatus

public java.lang.String getStatus()

Returns:

status