org.emboss.jemboss.soap
Class CallAjax

java.lang.Object
  org.emboss.jemboss.soap.CallAjax

public class CallAjax

extends java.lang.Object

Calls the EMBOSS ajax library

Field Summary

private PrivateRequest	epr request to private server
private int	length sequence length
private boolean	protein type of sequence protein or nucleotide
private float	weight sequence weight

Constructor Summary

CallAjax(java.lang.String fileContent, java.lang.String seqtype, JembossParams mysettings)

Method Summary

int	getLength() Get the sequence length
java.lang.String	getStatus() Get the status
java.lang.String	getStatusMsg() Get the message
float	getWeight() Get the sequence weight
boolean	isProtein() Deternmine the sequence type

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

length

private int length

sequence length

weight

private float weight

sequence weight

protein

private boolean protein

type of sequence protein or nucleotide

epr

private PrivateRequest epr

request to private server

Constructor Detail

CallAjax

public CallAjax(java.lang.String fileContent,
                java.lang.String seqtype,
                JembossParams mysettings)
         throws JembossSoapException

Parameters:

fileContent - file content or server file name

seqtype - sequence or seqset

mysettings - jemboss properties

Throws:

JembossSoapException - if connection fails

Method Detail

getStatus

public java.lang.String getStatus()

Get the status

Returns:

status

getStatusMsg

public java.lang.String getStatusMsg()

Get the message

Returns:

message

getLength

public int getLength()

Get the sequence length

Returns:

sequence length

getWeight

public float getWeight()

Get the sequence weight

Returns:

sequence weight

isProtein

public boolean isProtein()

Deternmine the sequence type

Returns:

true if a protein