Datatypes:
AjPFile | Assembly data output |
none | Miscellaneous functions |
Sections:
assembly data outputs | Output |
Functions:
ajAssemoutWrite | Write assembly data in a named format |
ajAssemoutWriteNext | Write latest chunk of assembly data in a named format |
AjBool ajAssemoutWrite ( AjPOutfile outf, const AjPAssem assem );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPOutfile | outf | Modify | Output file |
const AjPAssem | assem | Input | Assembly data object |
AjBool | RETURN | True on success |
From EMBOSS 6.5.0
AjBool ajAssemoutWriteNext ( AjPOutfile outf, const AjPAssem assem );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPOutfile | outf | Modify | Output file |
const AjPAssem | assem | Input | Assembly data object |
AjBool | RETURN | True on success |
From EMBOSS 6.5.0
Sections:
Casts |
Functions:
ajAssemoutprintBook | Reports the assembly format internals as Docbook text |
ajAssemoutprintHtml | Reports the internal data structures |
ajAssemoutprintText | Reports the internal data structures |
ajAssemoutprintWiki | Reports the asembly output format internals as wikitext |
void ajAssemoutprintBook ( AjPFile outf );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
void | RETURN |
From EMBOSS 6.4.0
void ajAssemoutprintHtml ( AjPFile outf );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
void | RETURN |
From EMBOSS 6.4.0
void ajAssemoutprintText ( AjPFile outf, AjBool full );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
AjBool | full | Input | Full report (usually ajFalse) |
void | RETURN |
From EMBOSS 6.4.0
void ajAssemoutprintWiki ( AjPFile outf );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
void | RETURN |
From EMBOSS 6.4.0
Functions:
ajAssemoutformatFind | Looks for the specified format(s) in the internal definitions and returns the index. |
ajAssemoutformatTest | Tests whether a named assembly output format is known |
AjBool ajAssemoutformatFind ( const AjPStr format, ajint* iformat );
Type | Name | Read/Write | Description |
---|---|---|---|
const AjPStr | format | Input | Format required. |
ajint* | iformat | Output | Index |
AjBool | RETURN | ajTrue on success. |
From EMBOSS 6.4.0
AjBool ajAssemoutformatTest ( const AjPStr format );
Type | Name | Read/Write | Description |
---|---|---|---|
const AjPStr | format | Input | Format |
AjBool | RETURN | ajTrue if formats was accepted |
From EMBOSS 6.4.0
Functions:
ajAssemoutExit | Cleans up assembly output internal memory |
void ajAssemoutExit ( void );
Type | Name | Read/Write | Description |
---|---|---|---|
void | RETURN |
From EMBOSS 6.4.0