Datatypes:
AjPFile | Obo Term output |
none | Miscellaneous functions |
Sections:
obo term outputs | Output |
Functions:
ajObooutWrite | Write an OBO term in a named format |
AjBool ajObooutWrite ( AjPOutfile outf, const AjPObo obo );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPOutfile | outf | Modify | Output file |
const AjPObo | obo | Input | Obo term object |
AjBool | RETURN | True on success |
From EMBOSS 6.4.0
Sections:
Casts |
Functions:
ajObooutprintBook | Reports the obo term format internals as Docbook text |
ajObooutprintHtml | Reports the internal data structures |
ajObooutprintText | Reports the internal data structures |
ajObooutprintWiki | Reports the obo term output format internals as wikitext |
void ajObooutprintBook ( AjPFile outf );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
void | RETURN |
From EMBOSS 6.4.0
void ajObooutprintHtml ( AjPFile outf );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
void | RETURN |
From EMBOSS 6.4.0
void ajObooutprintText ( AjPFile outf, AjBool full );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
AjBool | full | Input | Full report (usually ajFalse) |
void | RETURN |
From EMBOSS 6.4.0
void ajObooutprintWiki ( AjPFile outf );
Type | Name | Read/Write | Description |
---|---|---|---|
AjPFile | outf | Modify | Output file |
void | RETURN |
From EMBOSS 6.4.0
Functions:
ajObooutformatFind | Looks for the specified format(s) in the internal definitions and returns the index. |
ajObooutformatTest | Tests whether a named OBO output format is known |
AjBool ajObooutformatFind ( const AjPStr format, ajint* iformat );
Type | Name | Read/Write | Description |
---|---|---|---|
const AjPStr | format | Input | Format required. |
ajint* | iformat | Output | Index |
AjBool | RETURN | ajTrue on success. |
From EMBOSS 6.4.0
AjBool ajObooutformatTest ( const AjPStr format );
Type | Name | Read/Write | Description |
---|---|---|---|
const AjPStr | format | Input | Format |
AjBool | RETURN | ajTrue if formats was accepted |
From EMBOSS 6.4.0
Functions:
ajObooutExit | Cleans up obo term outputinternal memory |
void ajObooutExit ( void );
Type | Name | Read/Write | Description |
---|---|---|---|
void | RETURN |
From EMBOSS 6.4.0