ajrefseqwrite.c

Datatypes:

AjPOutfile	Reference sequence data output
none	Miscellaneous functions

Datatype: AjPOutfile

Sections:

reference sequence data outputs

Output

AjPOutfile: reference sequence data outputs

Functions:

ajRefseqoutWrite

Write refseq data in a named format

Function ajRefseqoutWrite

Prototype

AjBool ajRefseqoutWrite (
      AjPOutfile outf,
      const AjPRefseq refseq
);

Type	Name	Read/Write	Description
AjPOutfile	outf	Modify	Output file
const AjPRefseq	refseq	Input	Refseq data object
AjBool		RETURN	True on success

In release 6.5.0

Datatype: none

Sections:

Print

Casts

Section: Print

Functions:

ajRefseqoutprintBook	Reports the reference sequence format internals as Docbook text
ajRefseqoutprintHtml	Reports the internal data structures
ajRefseqoutprintText	Reports the internal data structures
ajRefseqoutprintWiki	Reports the reference sequence output format internals as wikitext

Function ajRefseqoutprintBook

Prototype

void ajRefseqoutprintBook (
      AjPFile outf
);

Type	Name	Read/Write	Description
AjPFile	outf	Modify	Output file
void		RETURN

In release 6.5.0

Function ajRefseqoutprintHtml

Prototype

void ajRefseqoutprintHtml (
      AjPFile outf
);

Type	Name	Read/Write	Description
AjPFile	outf	Modify	Output file
void		RETURN

In release 6.5.0

Function ajRefseqoutprintText

Prototype

void ajRefseqoutprintText (
      AjPFile outf,
      AjBool full
);

Type	Name	Read/Write	Description
AjPFile	outf	Modify	Output file
AjBool	full	Input	Full report (usually ajFalse)
void		RETURN

In release 6.5.0

Function ajRefseqoutprintWiki

Prototype

void ajRefseqoutprintWiki (
      AjPFile outf
);

Type	Name	Read/Write	Description
AjPFile	outf	Modify	Output file
void		RETURN

In release 6.5.0

Section: cast

Functions:

ajRefseqoutformatFind	Looks for the specified format(s) in the internal definitions and returns the index.
ajRefseqoutformatTest	Tests whether a named refseq output format is known

Function ajRefseqoutformatFind

Prototype

AjBool ajRefseqoutformatFind (
      const AjPStr format,
      ajint* iformat
);

Type	Name	Read/Write	Description
const AjPStr	format	Input	Format required.
ajint*	iformat	Output	Index
AjBool		RETURN	ajTrue on success.

In release 6.5.0

Function ajRefseqoutformatTest

Prototype

AjBool ajRefseqoutformatTest (
      const AjPStr format
);

Type	Name	Read/Write	Description
const AjPStr	format	Input	Format
AjBool		RETURN	ajTrue if formats was accepted

In release 6.5.0

Section: Miscellaneous

Functions:

ajRefseqoutExit

Cleans up reference sequence output internal memory

Function ajRefseqoutExit

Prototype

void ajRefseqoutExit (
      void
);

Type	Name	Read/Write	Description
void		RETURN

In release 6.5.0