ajvar.c

Datatypes:

AjPVar	Variation data
AjPVarData	Variation data records
AjPVarField	Variation field
AjPVarHeader	Variation header
AjPVarSample	Variation sample
none	Miscellaneous functions

Datatype: AjPVar

Sections:

constructors	Constructors
Variation data destructors	Destructors
Casts	Casts
variation data modifiers	Modifiers

AjPVar: constructors

Functions:

ajVarNew

Variation data constructor

Function ajVarNew

Prototype

AjPVar ajVarNew (
      void
);

Type	Name	Read/Write	Description
AjPVar		RETURN	New object

From EMBOSS 6.4.0

AjPVar: Variation data destructors

Functions:

ajVarDel

Variation data destructor

Function ajVarDel

Prototype

void ajVarDel (
      AjPVar* Pvar
);

Type	Name	Read/Write	Description
AjPVar*	Pvar	Delete	Variation data object to delete
void		RETURN

From EMBOSS 6.4.0

AjPVar: Casts

Functions:

ajVarGetDb	Return the database name
ajVarGetId	Return the identifier
ajVarGetQryC	Returns the query string of a variation data object. Because this is a pointer to the real internal string the caller must take care not to change the character string in any way. If the string is to be changed (case for example) then it must first be copied.
ajVarGetQryS	Returns the query string of a variation data object. Because this is a pointer to the real internal string the caller must take care not to change the character string in any way. If the string is to be changed (case for example) then it must first be copied.

Function ajVarGetDb

Prototype

const AjPStr ajVarGetDb (
      const AjPVar var
);

Type	Name	Read/Write	Description
const AjPVar	var	Input	Variation
const AjPStr		RETURN	Database name

From EMBOSS 6.4.0

Function ajVarGetId

Prototype

const AjPStr ajVarGetId (
      const AjPVar var
);

Type	Name	Read/Write	Description
const AjPVar	var	Input	Variation
const AjPStr		RETURN	Returned id

From EMBOSS 6.4.0

Function ajVarGetQryC

Prototype

const char* ajVarGetQryC (
      const AjPVar var
);

Type	Name	Read/Write	Description
const AjPVar	var	Input	Variation data object.
const char*		RETURN	Query as a character string.

From EMBOSS 6.4.0

Function ajVarGetQryS

Prototype

const AjPStr ajVarGetQryS (
      const AjPVar var
);

Type	Name	Read/Write	Description
const AjPVar	var	Input	Variation data object.
const AjPStr		RETURN	Query as a string.

From EMBOSS 6.4.0

AjPVar: variation data modifiers

Functions:

ajVarClear	Resets all data for a variation data object so that it can be reused.
ajVarReset	Resets all data for a variation data object so that it can be reused.

Function ajVarClear

Prototype

void ajVarClear (
      AjPVar var
);

Type	Name	Read/Write	Description
AjPVar	var	Modify	Variation data object
void		RETURN

From EMBOSS 6.4.0

Function ajVarReset

Prototype

void ajVarReset (
      AjPVar var
);

Type	Name	Read/Write	Description
AjPVar	var	Modify	Variation data object
void		RETURN

From EMBOSS 6.5.0

Datatype: AjPVarData

Sections:

constructors	Constructors
Variation data record destructors	Destructors
variation data record modifiers	Modifiers

AjPVarData: constructors

Functions:

ajVardataNew

Variation data record constructor

Function ajVardataNew

Prototype

AjPVarData ajVardataNew (
      void
);

Type	Name	Read/Write	Description
AjPVarData		RETURN	New object

From EMBOSS 6.5.0

AjPVarData: Variation data record destructors

Functions:

ajVardataDel

Variation data record destructor

Function ajVardataDel

Prototype

void ajVardataDel (
      AjPVarData* Pvar
);

Type	Name	Read/Write	Description
AjPVarData*	Pvar	Delete	Variation data record object to delete
void		RETURN

From EMBOSS 6.5.0

AjPVarData: variation data record modifiers

Functions:

ajVardataClear

Resets all data for a variation data record object so that it can be reused.

Function ajVardataClear

Prototype

void ajVardataClear (
      AjPVarData var
);

Type	Name	Read/Write	Description
AjPVarData	var	Modify	Variation data record object
void		RETURN

From EMBOSS 6.5.0

Datatype: AjPVarField

Sections:

constructors	Constructors
Variation field destructors	Destructors
variation field modifiers	Modifiers
variation field casts	Casts

AjPVarField: constructors

Functions:

ajVarfieldNew

Variation data constructor

Function ajVarfieldNew

Prototype

AjPVarField ajVarfieldNew (
      void
);

Type	Name	Read/Write	Description
AjPVarField		RETURN	New object

From EMBOSS 6.5.0

AjPVarField: Variation field destructors

Functions:

ajVarfieldDel

Variation field destructor

Function ajVarfieldDel

Prototype

void ajVarfieldDel (
      AjPVarField* Pvar
);

Type	Name	Read/Write	Description
AjPVarField*	Pvar	Delete	Variation field object to delete
void		RETURN

From EMBOSS 6.5.0

AjPVarField: variation field modifiers

Functions:

ajVarfieldClear

Resets all data for a variation field object so that it can be reused.

Function ajVarfieldClear

Prototype

void ajVarfieldClear (
      AjPVarField var
);

Type	Name	Read/Write	Description
AjPVarField	var	Modify	Variation field object
void		RETURN

From EMBOSS 6.5.0

AjPVarField: variation field casts

Functions:

ajVarfieldGetNumber	Return the header value for the Number field
ajVarfieldGetType	Return the header value for the Type field

Function ajVarfieldGetNumber

Prototype

const char* ajVarfieldGetNumber (
      const AjPVarField var
);

Type	Name	Read/Write	Description
const AjPVarField	var	Input	Variation field object
const char*		RETURN	Header field value

From EMBOSS 6.5.0

Function ajVarfieldGetType

Prototype

const char* ajVarfieldGetType (
      const AjPVarField var
);

Type	Name	Read/Write	Description
const AjPVarField	var	Input	Variation field object
const char*		RETURN	Header field value

From EMBOSS 6.5.0

Datatype: AjPVarHeader

Sections:

constructors	Constructors
Variation header destructors	Destructors
variation header modifiers	Modifiers

AjPVarHeader: constructors

Functions:

ajVarheaderNew

Variation header constructor

Function ajVarheaderNew

Prototype

AjPVarHeader ajVarheaderNew (
      void
);

Type	Name	Read/Write	Description
AjPVarHeader		RETURN	New object

From EMBOSS 6.5.0

AjPVarHeader: Variation header destructors

Functions:

ajVarheaderDel

Variation header destructor

Function ajVarheaderDel

Prototype

void ajVarheaderDel (
      AjPVarHeader* Pvar
);

Type	Name	Read/Write	Description
AjPVarHeader*	Pvar	Delete	Variation header object to delete
void		RETURN

From EMBOSS 6.5.0

AjPVarHeader: variation header modifiers

Functions:

ajVarheaderClear

Resets all data for a variation header object so that it can be reused.

Function ajVarheaderClear

Prototype

void ajVarheaderClear (
      AjPVarHeader var
);

Type	Name	Read/Write	Description
AjPVarHeader	var	Modify	Variation header object
void		RETURN

From EMBOSS 6.5.0

Datatype: AjPVarSample

Sections:

constructors	Constructors
Variation sample destructors	Destructors
variation sample modifiers	Modifiers

AjPVarSample: constructors

Functions:

ajVarsampleNew

Variation sample constructor

Function ajVarsampleNew

Prototype

AjPVarSample ajVarsampleNew (
      void
);

Type	Name	Read/Write	Description
AjPVarSample		RETURN	New object

From EMBOSS 6.5.0

AjPVarSample: Variation sample destructors

Functions:

ajVarsampleDel

Variation sample destructor

Function ajVarsampleDel

Prototype

void ajVarsampleDel (
      AjPVarSample* Pvar
);

Type	Name	Read/Write	Description
AjPVarSample*	Pvar	Delete	Variation sample object to delete
void		RETURN

From EMBOSS 6.5.0

AjPVarSample: variation sample modifiers

Functions:

ajVarsampleClear

Resets all data for a variation sample object so that it can be reused.

Function ajVarsampleClear

Prototype

void ajVarsampleClear (
      AjPVarSample var
);

Type	Name	Read/Write	Description
AjPVarSample	var	Modify	Variation sample object
void		RETURN

From EMBOSS 6.5.0

Datatype: none

Sections:

exit	Miscellaneous

Section: exit

Functions:

ajVarExit

Cleans up variation processing internal memory

Function ajVarExit

Prototype

void ajVarExit (
      void
);

Type	Name	Read/Write	Description
void		RETURN

From EMBOSS 6.4.0