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java.lang.Object org.emboss.jemboss.soap.ShowDB
Run showdb and find the available scoring matrices and codon usage tables on the Jemboss server
Field Summary | |
private java.util.Vector |
codons
codon usage tables |
private java.lang.String |
dbText
showdb output |
private java.util.Vector |
matrices
scoring matrices |
private java.lang.String |
status
status |
private java.lang.String |
statusmsg
status message |
Constructor Summary | |
ShowDB(JembossParams mysettings)
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Method Summary | |
java.util.Vector |
getCodonUsage()
Get the codon usage tables |
java.lang.String |
getDBText()
Get the output from showdb |
java.util.Vector |
getMatrices()
Get the available matrices |
java.lang.String |
getStatus()
Get the status of the request |
java.lang.String |
getStatusMsg()
Get the status message |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Field Detail |
private java.lang.String statusmsg
private java.lang.String status
private java.lang.String dbText
private java.util.Vector matrices
private java.util.Vector codons
Constructor Detail |
public ShowDB(JembossParams mysettings)
mysettings
- jemboss propertiesMethod Detail |
public java.lang.String getStatus()
public java.lang.String getStatusMsg()
public java.lang.String getDBText()
public java.util.Vector getMatrices()
public java.util.Vector getCodonUsage()
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