a q s
As SRS but returns the sequences in FASTA format. The definition must include format: fasta so that EMBOSS will read the results in FASTA format.
DB mydb [ #required parameters method: "srsfasta" format: "fasta" type: "N" #optional parameters dbalias: "embl" fields: "sv des key org" app: "getz" comment: "My srs indexed database" release: "63.0" ]
This access method builds an SRS commandline query to getz. If you have getz installed under another name, define this as app:
The SRS query by default uses the EMBOSS database name. If the database has a different name in SRS, define dbalias: as the database name to pass to SRS.
SRS will return the results using 'getz -f -sf fasta' so the format must be 'fasta'.
To query using the additional fields SRS supports, add them as fields: