org.emboss.jemboss
Class Jemboss

java.lang.Object
  org.emboss.jemboss.Jemboss

All Implemented Interfaces:

java.awt.event.ActionListener, java.util.EventListener

public class Jemboss

extends java.lang.Object

implements java.awt.event.ActionListener

Java interface to EMBOSS (http://www.emboss.org/). This can be run in two different ways. In a STANDALONE mode with a locally installation of EMBOSS, or CLIENT-SERVER mode download the client from a site, such as the HGMP, which runs the Jemboss server.

Nested Class Summary

(package private) class

Jemboss.winExit Extends WindowAdapter to close window and save any session properties and clean up

Field Summary

private javax.swing.ImageIcon	bwdArrow Image for hiding the local filemanager
private javax.swing.JButton	extend Button to open local filemanager
private javax.swing.JFrame	f Jemboss frame
private javax.swing.ImageIcon	fwdArrow Image for displaying the local filemanager
private static java.awt.Dimension	jdim Jemboss window dimension
private static java.awt.Dimension	jdimExtend Jemboss window dimension with local filemanager displayed
private SetUpMenuBar	mainMenu Jemboss main menu
private javax.swing.JPanel	p3 Local filemanager panel
private javax.swing.JSplitPane	pmain Jemboss split pain
static PendingResults	resultsManager to manage the pending results
private javax.swing.JScrollPane	scrollTree Scroll pane for local filemanager
static DragTree	tree Local filemanager
(package private) static boolean	withSoap true if in client-server mode (using SOAP)

Constructor Summary

Jemboss()
Display the Jemboss GUI.

Method Summary

void	actionPerformed(java.awt.event.ActionEvent ae) Action event to open the file manager
static void	main(java.lang.String[] args) Launches Jemboss in standalone or client-server mode.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

f

private javax.swing.JFrame f

Jemboss frame

pmain

private javax.swing.JSplitPane pmain

Jemboss split pain

p3

private javax.swing.JPanel p3

Local filemanager panel

tree

public static DragTree tree

Local filemanager

extend

private javax.swing.JButton extend

Button to open local filemanager

scrollTree

private javax.swing.JScrollPane scrollTree

Scroll pane for local filemanager

withSoap

static boolean withSoap

true if in client-server mode (using SOAP)

resultsManager

public static PendingResults resultsManager

to manage the pending results

jdim

private static java.awt.Dimension jdim

Jemboss window dimension

jdimExtend

private static java.awt.Dimension jdimExtend

Jemboss window dimension with local filemanager displayed

fwdArrow

private javax.swing.ImageIcon fwdArrow

Image for displaying the local filemanager

bwdArrow

private javax.swing.ImageIcon bwdArrow

Image for hiding the local filemanager

mainMenu

private SetUpMenuBar mainMenu

Jemboss main menu

Constructor Detail

Jemboss

public Jemboss()

Display the Jemboss GUI.

Method Detail

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent ae)

Action event to open the file manager

Specified by:

actionPerformed in interface java.awt.event.ActionListener

Parameters:

ae - the action event generated

main

public static void main(java.lang.String[] args)

Launches Jemboss in standalone or client-server mode.